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Schema
Citing CMDGA
Clear Filters
Annotation type
86
histone modifications
18
accessible chromatin
15
gene expression
4
eQTL
2
hQTL
2
target gene predictions
1
binding sites
1
meQTL
1
sQTL
Annotation Category
2
Target gene links
1
Genetic variant effects
Annotation type Category
1
DNA methylation profiling by array assay
1
pCHi-C
1
snATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
54
HeLa-S3
38
H1-hESC
22
K562
19
HFFc6
18
A549
13
common myeloid progenitor, CD34-positive
10
hematopoietic multipotent progenitor cell
10
pericyte cell
9
B cell
9
CD4-positive, alpha-beta memory T cell
7
CD8-positive, alpha-beta memory T cell
7
GM12878
7
H9
7
endothelial cell
7
lymphocyte
7
smooth muscle cell
6
mononuclear cell
6
olfactory receptor cell
5
MCF-7
5
neural progenitor cell
5
trophoblast cell
4
CD14-positive monocyte
4
CyT49
4
HUES8
4
T cell
4
colon epithelial cell
4
fibroblast
4
fibroblast of cardiac tissue
4
foreskin keratinocyte
4
iPSC derived cell line
4
keratinocyte
4
mammary gland epithelial cell
4
natural killer cell
4
neutrophil
4
pancreatic delta cell
4
regulatory T cell
3
CD4-positive, alpha-beta T cell
3
CD8-positive, alpha-beta T cell
3
HCT116
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
astrocyte
3
cardiomyocytes (cardiac muscle cell)
3
endometrium adenocarcinoma
3
endothelial cell of umbilical vein
3
fibroblast of dermis
3
fibroblast of lung
3
hepatocyte
3
immortal human breast epithelial cell line cell
3
luminal epithelial cell of mammary gland
3
macrophage
3
mesenchymal stem cell
3
monocyte
3
naive T cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
neurosphere
3
pancreatic alpha cell
3
pancreatic beta cell
3
skin fibroblast
2
22Rv1
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
HepG2
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
activated CD4-positive, alpha-beta T cell
2
adipocyte
2
blood vessel smooth muscle cell
2
bronchial epithelial cell
2
cortical cell of adrenal gland
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
endodermal cell
2
enteric smooth muscle cell
2
epithelial cell of prostate
2
fibroblast of breast
2
foreskin fibroblast
2
gabaergic neuron
2
glutamatergic neuron
2
kidney tubule cell
2
lymphocyte of B lineage (iPSC)
2
megakaryocyte
2
memory B cell
2
mesendoderm
2
muscle cell
2
myoepithelial cell of mammary gland
2
naive B cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
pancreatic A cell
2
pancreatic acinar cell
2
pancreatic ductal cell
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
smooth muscle cell of the esophagus
2
type B pancreatic cell
2
type II pneumocyte
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
B-lymphoblastoid cell line
1
BE(2)-C
1
BJ cell
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
EndoC_BH1
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12875
1
GM12891
1
GM12892
1
GM18486
1
GM18505
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM23248
1
GM23338
1
H4
1
H54
1
H7-hESC
1
HAP-1
1
HEK293
1
HEK293T
1
HK-2 cell
1
HL-60
1
HPDE6-E6E7
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
HuH-7
1
HuH-7.5
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
IMR-90
1
KARPAS-422 cell
1
KBM-7
1
KMS-11
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
LHCN-M2
1
LoVo cell
1
Loucy
1
M059J
1
MG63
1
MM.1S
1
NB4
1
NCI-H226 cell
1
NCI-H460 cell
1
NCI-H929
1
NT2-D1 cell
1
OCI-LY1
Life stage
1
adult
Date released
1
January, 2021
1
May, 2020
1
May, 2021
Software used
1
chicago
1
cicero
1
limix
1
minfi
Lab
2
AMP-T2D consortium
Jesse Engreitz, Stanford University
1
Kyle Gaulton, UCSD
Project
2
AMP
1
T1D
RFA
2
AMP
1
T1D
biosample_type!
tissue
lab.title!
Jesse Engreitz, Stanford University
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR301CXZ
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 196 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR158NKH
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of classical_monocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR499JJX
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of monocyte
Lab:
AMP-T2D consortium
Project:
AMP