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Annotation type
741
target gene predictions
615
accessible chromatin
388
chromatin state
376
gene expression
340
candidate regulatory elements
162
differential activity
123
histone modifications
98
binding sites
84
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56
eQTL
9
caQTL
5
hQTL
3
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3
sQTL
1
other
Annotation Category
3
Genetic variant effects
Annotation type Category
3
DNA methylation profiling by array assay
Available data
2
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
0
cell line
Biosample term
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neutrophil
Life stage
3
adult
Date released
3
May, 2021
Software used
3
limix
3
minfi
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
award.project!
T1D
month_released!
February, 2021
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FileSet
DSR135HUG
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 132 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR197ERC
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR301CXZ
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 196 individuals.
Lab:
AMP-T2D consortium
Project:
AMP