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Citing CMDGA
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Annotation type
1658
candidate regulatory elements
1158
target gene predictions
975
histone modifications
938
chromatin state
813
binding sites
641
accessible chromatin
139
variant allelic effects
138
eQTL
43
gene expression
11
caQTL
4
sQTL
3
hQTL
3
other
2
Fine-mapped variants
2
meQTL
2
variant to gene
1
pQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
2
DNA methylation profiling by array assay
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
neutrophil
Life stage
2
adult
Date released
2
May, 2021
Software used
2
limix
2
minfi
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
neutrophil
files.file_type!
tsv
organ_slims!
uterus
Showing 2 of 2 results
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FileSet
DSR135HUG
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 132 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR301CXZ
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 196 individuals.
Lab:
AMP-T2D consortium
Project:
AMP