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Annotation type
2638
pQTL
904
chromatin state
689
gene expression
172
differential activity
84
Fine-mapped variants
56
eQTL
17
variant allelic effects
10
accessible chromatin
6
sQTL
2
hQTL
2
variant to gene
1
histone modifications
1
meQTL
1
other
1
representative DNase hypersensitivity sites
Annotation Category
1
Genetic variant effects
Annotation type Category
1
DNA methylation profiling by array assay
Available data
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
1
naive thymus-derived CD4-positive, alpha-beta T cell
Life stage
1
adult
Date released
1
May, 2021
Software used
1
limix
1
minfi
Lab
1
AMP-T2D consortium
Project
1
AMP
Collection Tags
1
BLUEPRINT
1
T1D
RFA
1
AMP
files.file_type!
bed bed3+
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FileSet
DSR135HUG
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 132 individuals.
Lab:
AMP-T2D consortium
Project:
AMP