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Citing CMDGA
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Annotation type
552
gene expression
543
accessible chromatin
446
candidate regulatory elements
433
target gene predictions
304
histone modifications
241
chromatin state
152
differential activity
138
binding sites
83
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46
eQTL
11
caQTL
5
hQTL
3
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3
sQTL
1
other
1
representative DNase hypersensitivity sites
Annotation Category
1
Genetic variant effects
Annotation type Category
1
ChIP-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
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Homo sapiens
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1
primary cell
1
tissue
0
in vitro differentiated cells
Biosample term
1
naive thymus-derived CD4-positive, alpha-beta T cell
Life stage
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adult
Date released
1
May, 2021
Software used
1
limix
1
macs
Lab
1
AMP-T2D consortium
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AMP
RFA
1
AMP
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ovary
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FileSet
DSR801ZQH
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP