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Schema
Citing CMDGA
Clear Filters
Annotation type
1663
candidate regulatory elements
1353
target gene predictions
960
histone modifications
940
chromatin state
816
binding sites
633
gene expression
591
accessible chromatin
167
differential activity
143
eQTL
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
4
sQTL
4
variant to gene
3
meQTL
3
other
1
representative DNase hypersensitivity sites
Annotation Category
2
Others
1
Genetic variant effects
Annotation type Category
1
ChIP-seq
Available data
2
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Biosample term
1
Pancreatic islets
1
naive thymus-derived CD4-positive, alpha-beta T cell
Life stage
1
adult
Date released
1
May, 2020
1
May, 2021
1
November, 2019
Software used
1
limix
1
macs
Lab
2
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
files.file_type!
xls
month_released!
August, 2021
June, 2020
organ_slims!
mouth
Showing 3 of 3 results
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Download
FileSet
DSR801ZQH
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR048FDK
released
Annotation file set
: Test annotation
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR942GKV
released
Annotation file set
: Annotation for gene TSS
Lab:
Kyle Gaulton, UCSD
Project:
AMP