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Annotation type
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 976histone modifications
  • 903accessible chromatin
  • 817binding sites
  • 133eQTL
  • 124variant allelic effects
  • 40chromatin state
  • 13caQTL
  • 3hQTL
  • 2meQTL
  • 2other
  • 2pQTL
  • 2variant to gene
  • 1sQTL
Annotation Category
  • 2Genetic variant effects
Annotation type Category
  • 2quantitative proteomics
Available data
  • 2637tsv
  • 2bed bed3+
File set status
  • 2released
Genome assembly (visualization)
  • 2hg19
Organism
  • 2Homo sapiens
Biosample type
  • 2tissue
Biosample term
  • 1cartilage tissue
  • 1cerebrospinal fluid
Organ
  • 1bodily fluid
  • 1connective tissue
Life stage
  • 2adult
Date released
  • 2August, 2021
Software used
  • 1fastqtl
  • 1peer
  • 1r
Lab
  • 1AMP-T2D consortium
  • 1ITG
Project
  • 1AMP
  • 1ITG
Collection Tags
  • 2AMP
  • 2T2DKP
RFA
  • 1AMP
  • 1ITG

Showing 2 of 2 results

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  • FileSet

    DSR561OLH

    released

    Annotation file set: pQTLs from CSF levels of 1,126 proteins in 133 subjects by performing a genome-wide association analysis of 514,227 SNPs
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR524ZAH

    released

    Annotation file set: pQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
    Lab: ITG
    Project: ITG
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