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Annotation type
1659
candidate regulatory elements
1147
target gene predictions
915
chromatin state
849
accessible chromatin
845
histone modifications
815
binding sites
531
gene expression
167
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140
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138
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13
caQTL
4
variant to gene
2
Fine-mapped variants
2
other
1
representative DNase hypersensitivity sites
1
sQTL
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
Available data
1
tsv
File set status
1
released
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
1
myocyte
Date released
1
February, 2021
Software used
1
altius-index
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
month_released!
August, 2021
March, 2020
May, 2021
organ_slims!
stomach
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Download
FileSet
DSR124JTW
released
Annotation file set
: DNase I Hypersensitive Sites (DHSs) defined using a consensus-based approach (https://github.com/Altius/Index) across 733 human biosamples. Each DHS is annotated with a signal level which can be used as a confidence score, as well as estimates for its summit position and summit variability (as captured by the 'core' coordinates).
Lab:
AMP-T2D consortium
Project:
AMP