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Annotation type
2640
pQTL
1709
candidate regulatory elements
1357
target gene predictions
977
histone modifications
944
chromatin state
913
accessible chromatin
817
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689
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178
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172
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141
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84
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11
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6
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5
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4
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3
meQTL
3
other
1
representative DNase hypersensitivity sites
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
Available data
1
tsv
File set status
1
released
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
1
myocyte
Date released
1
February, 2021
Software used
1
altius-index
Lab
1
AMP-T2D consortium
Project
1
AMP
Collection Tags
1
ENCODE
RFA
1
AMP
software_used.software.name!
matrix-eQTL
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FileSet
DSR124JTW
released
Annotation file set
: DNase I Hypersensitive Sites (DHSs) defined using a consensus-based approach (https://github.com/Altius/Index) across 733 human biosamples. Each DHS is annotated with a signal level which can be used as a confidence score, as well as estimates for its summit position and summit variability (as captured by the 'core' coordinates).
Lab:
AMP-T2D consortium
Project:
AMP