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Schema
Citing CMDGA
Clear Filters
Annotation type
924
candidate regulatory elements
512
target gene predictions
506
chromatin state
196
accessible chromatin
112
eQTL
107
gene expression
87
histone modifications
74
Fine-mapped variants
48
variant allelic effects
34
binding sites
5
differential activity
4
variant to gene
3
pQTL
caQTL
2
sQTL
1
other
Annotation Category
2
Genetic variant effects
Annotation type Category
2
RNA-seq
1
Expression arrays
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
3
primary cell
2
tissue
Biosample term
2
islet of Langerhans
Organ
2
pancreas
Life stage
1
adult
Date released
1
August, 2021
1
March, 2023
Software used
1
matrix-eQTL
1
qTLtools
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type!
caQTL
organ_slims!
skin of body
urinary bladder
Showing 2 of 2 results
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FileSet
DSR615JGJ
released
Annotation file set
: Lead variant-to-phenotype associations identified using permutations. Contains data for all phenotypes (eGene/Junction) with an sQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR276ICN
released
Annotation file set
: sQTL annotation of islet of Langerhans from PMID:25201977
Lab:
AMP-T2D consortium
Project:
AMP