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Schema
Citing CMDGA
Clear Filters
Annotation type
781
histone modifications
770
binding sites
726
candidate regulatory elements
564
gene expression
550
target gene predictions
403
accessible chromatin
162
differential activity
91
variant allelic effects
55
chromatin state
11
eQTL
5
caQTL
5
hQTL
3
meQTL
3
sQTL
2
other
representative DNase hypersensitivity sites
Annotation Category
3
Genetic variant effects
Annotation type Category
3
RNA-seq
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
tissue
Biosample term
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neutrophil
Life stage
3
adult
Date released
3
May, 2021
Software used
3
limix
3
sqtlseeker
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
representative DNase hypersensitivity sites
assembly!
GRCh38
biosample_type!
tissue
organ_slims!
eye
Showing 3 of 3 results
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FileSet
DSR631VBI
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR661WZX
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR337BHM
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP