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Annotation type
1666
candidate regulatory elements
1354
target gene predictions
977
histone modifications
942
chromatin state
912
accessible chromatin
816
binding sites
682
gene expression
167
differential activity
140
variant allelic effects
72
Fine-mapped variants
57
eQTL
13
caQTL
5
hQTL
4
sQTL
3
meQTL
3
other
3
pQTL
2
variant to gene
1
representative DNase hypersensitivity sites
Annotation Category
4
Genetic variant effects
Annotation type Category
4
RNA-seq
1
Expression arrays
Available data
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
tissue
Biosample term
1
islet of Langerhans
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neutrophil
Organ
1
pancreas
Life stage
4
adult
Date released
3
May, 2021
1
August, 2021
Software used
3
limix
3
sqtlseeker
1
matrix-eQTL
qTLtools
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
assembly!
hg18
organ_slims!
breast
software_used.software.name!
qTLtools
Showing 4 of 4 results
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Download
FileSet
DSR276ICN
released
Annotation file set
: sQTL annotation of islet of Langerhans from PMID:25201977
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR631VBI
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR661WZX
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR337BHM
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP