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Clear Filters
Annotation type
  • 888histone modifications
  • 839target gene predictions
  • 781binding sites
  • 772candidate regulatory elements
  • 716accessible chromatin
  • 573gene expression
  • 433chromatin state
  • 162differential activity
  • 92variant allelic effects
  • 60eQTL
  • 11caQTL
  • 5hQTL
  • 5sQTL
  • 3meQTL
  • 2Fine-mapped variants
  • 2other
  • 1representative DNase hypersensitivity sites
Annotation Category
  • 5Genetic variant effects
Annotation type Category
  • 5RNA-seq
Available data
  • 2csv
File set status
  • 5released
Genome assembly (visualization)
  • 2hg19
Organism
  • 5Homo sapiens
Biosample type
  • 5primary cell
  • tissue
Biosample term
  • 2articular chondrocyte
  • 1monocyte
  • 1naive thymus-derived CD4-positive, alpha-beta T cell
  • 1neutrophil
Organ
  • 2connective tissue
Life stage
  • 5adult
Date released
  • 3May, 2021
  • 2January, 2025
Software used
  • 3limix
  • 3sqtlseeker
  • 2qTLtools
Lab
  • 3AMP-T2D consortium
  • 2Doug Phanstiel, UNC
Project
  • 3AMP
  • 2community
Collection Tags
  • 3BLUEPRINT
  • 3T1D
RFA
  • 3AMP
  • 2community
biosample_type!
  • tissue

Showing 5 of 5 results

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  • FileSet

    DSR020DGY

    released

    Annotation file set: Splicing Quantitative Trait Loci (sQTL) from human primary articular chondrocytes under fibronectin fragment (FN-f) performed using RNA-seq data from 101 samples.
    Lab: Doug Phanstiel, UNC
    Project: community
  • FileSet

    DSR302PZQ

    released

    Annotation file set: Splicing Quantitative Trait Loci (sQTL) from human primary articular chondrocytes under hosphate buffer saline (PBS) resting performed using RNA-seq data from 101 samples.
    Lab: Doug Phanstiel, UNC
    Project: community
  • FileSet

    DSR631VBI

    released

    Annotation file set: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR661WZX

    released

    Annotation file set: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR337BHM

    released

    Annotation file set: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
    Lab: AMP-T2D consortium
    Project: AMP
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