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Schema
Citing CMDGA
Clear Filters
Annotation type
82
target gene predictions
80
accessible chromatin
73
candidate regulatory elements
49
gene expression
40
chromatin state
33
differential activity
29
binding sites
16
eQTL
16
histone modifications
12
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Annotation Category
2
Genetic variant effects
Annotation type Category
2
RNA-seq
1
Expression arrays
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
2
islet of Langerhans
Organ
2
pancreas
0
lymph node
0
mammary gland
0
pituitary gland
Life stage
1
adult
Date released
1
August, 2021
1
March, 2023
Software used
1
matrix-eQTL
1
qTLtools
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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FileSet
DSR615JGJ
released
Annotation file set
: Lead variant-to-phenotype associations identified using permutations. Contains data for all phenotypes (eGene/Junction) with an sQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR276ICN
released
Annotation file set
: sQTL annotation of islet of Langerhans from PMID:25201977
Lab:
AMP-T2D consortium
Project:
AMP