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Citing CMDGA
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Annotation type
1
accessible chromatin
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
16
HiC
1
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
18
heart
16
CD14-positive monocyte
16
brain
16
muscle of arm
16
stomach
15
lung
15
placenta
14
large intestine
14
muscle of leg
14
small intestine
13
left lung
13
muscle of back
12
kidney
12
thymus
11
right lung
10
adrenal gland
10
pituitary stalk
10
right kidney
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
spinal cord
7
trophoblast cell
6
CD4-positive, alpha-beta memory T cell
6
dendritic cell
5
adipocyte
5
muscle of trunk
4
chorionic villus
4
common myeloid progenitor, CD34-positive
4
foreskin keratinocyte
4
neural progenitor cell
3
B cell
3
SK-N-SH
3
T-helper 17 cell
3
chorion membrane
3
endothelial cell of umbilical vein
3
epithelial cell of prostate
3
fibroblast of dermis
3
fibroblast of lung
3
foreskin fibroblast
3
heart left ventricle
3
hepatocyte
3
keratinocyte
3
liver
3
neurosphere
3
retina
3
spleen
2
22Rv1
2
A673
2
BJAB cell
2
CD4-positive helper T cell
2
CD8-positive, alpha-beta T cell
2
CD8-positive, alpha-beta memory T cell
2
H1-hESC
2
H7-hESC
2
H9
2
HepG2
2
IMR-90
2
Jurkat
2
MCF 10A cell
2
NAMALWA cell
2
PC-9
2
Panc1
2
SK-N-DZ
2
T-cell
2
THP-1
2
U937
2
astrocyte
2
bronchial epithelial cell
2
cardiac muscle cell
2
dermis lymphatic vessel endothelial cell
2
endodermal cell
2
eye
2
fibroblast of cardiac tissue
2
heart right ventricle
2
iPS DF 19.11
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
mesenchymal stem cell
2
mesendoderm
2
neutrophil
2
osteoblast
2
ovary
2
psoas muscle
2
right renal cortex interstitium
2
right renal pelvis
2
sigmoid colon
2
skeletal muscle myoblast
2
skin fibroblast
2
tongue
2
trophoblast
1
A549
1
AG04449 cell
1
AG04450 cell
1
B cell, CD19-positive
1
BE(2)-C
1
BJ cell
1
CD1c-positive myeloid dendritic cell
1
CD56-positive, CD161-positive immature natural killer cell
1
CMK
CWRU1
1
DND-41
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G401
1
GM03348
1
GM06990
1
GM08714
1
GM12864
1
GM12865
1
GM12878
1
GM12891
1
GM12892
1
GM18507
1
HAP-1
1
HCT-116 cell
1
HEK293
1
HEK293T
1
HK-2 cell
1
HT-29
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
HeLa-S3
1
K562
1
KARPAS-422 cell
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
LNCAP
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MG63
1
MM.1S
1
NCCIT cell
1
NCI-H460 cell
1
NT2-D1 cell
1
OCI-LY7
1
SJCRH30
1
SK-N-MC
1
T cell
1
T-helper 1 cell
1
T-helper 2 cell
1
UCSF-4
1
WERI-Rb-1
1
WI38
1
adipose tissue
1
amnion
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
arm bone
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
beige adipocyte
1
bipolar neuron
1
body of pancreas
1
brain microvascular endothelial cell
1
breast epithelium
1
cardiac mesoderm primordium
1
cardiac ventricle
1
choroid plexus epithelial cell
1
colon carcinoma
1
colon epithelial cell
1
coronary artery
1
dermis blood vessel endothelial cell
1
ectodermal cell
1
embryonic facial prominence
1
endocrine pancreas
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
erythroblast
1
femur
1
fibroblast of arm
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin melanocyte
1
gastrocnemius medialis
1
germinal center
1
germinal matrix
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
hematopoietic multipotent progenitor cell
1
iPS DF 19.7
1
iPS DF 4.7 Cell Line
1
iPS DF 6.9
Organ
1
blood
1
bodily fluid
Life stage
adult
Date released
1
May, 2021
Software used
1
abc
Lab
1
Jesse Engreitz, Stanford University
Project
1
AMP
RFA
1
AMP
annotation_type!
binding sites
biosample_term_name!
CWRU1
relevant_life_stage!
adult
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR412LFE
released
Annotation file set
: enhancer-gene predicton of K562-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP