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Schema
Citing CMDGA
Clear Filters
Annotation type
6
binding sites
6
candidate regulatory elements
5
target gene predictions
4
chromatin state
3
accessible chromatin
1
histone modifications
1
variant allelic effects
Annotation Category
5
Target gene links
Annotation type Category
4
DNase-seq
3
ChIP-seq
2
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
6
MCF-7
4
mammary gland epithelial cell
3
luminal epithelial cell of mammary gland
2
T47D
2
myoepithelial cell of mammary gland
1
fibroblast of mammary gland
1
mammary epithelial cell
Organ
5
epithelium
5
mammary gland
Life stage
2
adult
1
unknown
Date released
3
September, 2022
1
May, 2021
1
November, 2021
Software used
3
r
2
abc
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
4
AMP
1
ENCODE
RFA
4
AMP
1
ENCODE3
annotation_type!
meQTL
Showing 5 of 5 results
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FileSet
DSR686OEX
released
Annotation file set
: Target gene predictions for BSS01213 mammary gland epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR532TRM
released
Annotation file set
: Target gene predictions for BSS01211 mammary gland epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR947KWU
released
Annotation file set
: Target gene predictions for BSS01209 mammary gland epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR990AWB
released
Annotation file set
: Target gene predictions of Mammary Epithelial from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR379EHB
released
Annotation file set
: enhancer-gene predicton of mammary_epithelial_cell-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP