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Schema
Citing CMDGA
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Annotation type
4
target gene predictions
3
accessible chromatin
3
binding sites
3
histone modifications
2
candidate regulatory elements
2
chromatin state
1
gene expression
Annotation Category
4
Target gene links
Annotation type Category
2
pCHi-C
1
ChIP-seq
1
DNase-seq
1
snATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
tissue
3
primary cell
1
in vitro differentiated cells
Biosample term
2
megakaryocyte
1
stromal cell of bone marrow
1
white adipose cell
Organ
117
epithelium
76
embryo
66
connective tissue
57
bodily fluid
56
uterus
55
blood
41
skin of body
34
lung
29
brain
29
pancreas
19
mammary gland
18
vasculature
16
intestine
16
kidney
13
bone element
13
prostate gland
12
blood vessel
12
extraembryonic component
11
large intestine
11
penis
10
liver
10
musculature of body
10
pituitary gland
9
lymph node
8
heart
4
adrenal gland
4
eye
4
stomach
4
vein
3
artery
3
bone marrow
3
bronchus
3
esophagus
3
lymphatic vessel
2
gonad
2
limb
2
lymphoid tissue
2
mouth
2
placenta
2
small intestine
1
adipose tissue
1
nose
1
ovary
1
spinal cord
1
testis
1
thyroid gland
Life stage
1
unknown
Date released
1
January, 2021
1
March, 2020
1
May, 2020
1
September, 2022
Software used
2
chicago
1
cicero
1
r
Lab
3
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
3
AMP
1
T1D
RFA
3
AMP
1
T1D
annotation_type!
other
biosample_type!
tissue
Showing 4 of 4 results
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Download
FileSet
DSR928GVV
released
Annotation file set
: Target gene predictions for BSS01661 stromal cell of bone marrow from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR345BXM
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR992TVD
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of megakaryocyte
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR355DOK
released
Annotation file set
: A target gene prediction annotation in white adipose cell of TSTSR423QSN pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP