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Schema
Citing CMDGA
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Annotation type
28
chromatin state
25
gene expression
16
accessible chromatin
16
binding sites
12
differential activity
9
Fine-mapped variants
6
eQTL
6
histone modifications
3
caQTL
3
target gene predictions
3
variant allelic effects
Annotation Category
3
Target gene links
Annotation type Category
DNase-seq
19
ChIP-seq
3
ATAC-seq
3
H3K27ac ChIP-Seq
2
HiC
1
pCHi-C
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
2
aorta
1
endothelial cell of umbilical vein
Organ
63
epithelium
52
embryo
52
uterus
28
blood
28
bodily fluid
25
connective tissue
24
pancreas
12
intestine
10
heart
6
large intestine
6
musculature of body
5
brain
5
skin of body
5
stomach
4
adrenal gland
4
liver
4
lung
4
vasculature
3
blood vessel
3
esophagus
3
mammary gland
3
small intestine
2
adipose tissue
2
bone element
2
bone marrow
2
gonad
2
ovary
2
thymus
1
bronchus
1
lymphatic vessel
1
lymphoid tissue
1
spleen
1
thyroid gland
1
urinary bladder
1
vein
Life stage
1
adult
Date released
3
March, 2020
Software used
2
hiccups
1
nospecificsoft_customcode
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
variant to gene
annotation_type_category!
DNase-seq
biosample_term_name!
type I cell of adrenal cortex
Showing 3 of 3 results
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FileSet
DSR049KAF
released
Annotation file set
: A target gene prediction annotation in endothelial cell of umbilical vein of DSR430XOJ Hi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR428FCH
released
Annotation file set
: A target gene prediction annotation in aorta of DSR073ZJB Hi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR452SBJ
released
Annotation file set
: A target gene prediction annotation in Human Aorta of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP