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Citing CMDGA
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Annotation type
3
accessible chromatin
1
variant allelic effects
0
target gene predictions
Annotation Category
1
Genetic variant effects
Annotation type Category
16
ChIP-seq
16
DNase-seq
2
ATAC-seq
1
pCHi-C
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
6
fibroblast
4
macrophage
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic delta cell
3
endothelial cell
3
enterocyte
3
myofibroblast cell
2
Schwann cell
2
T cell
2
basal cell
2
epithelial cell of esophagus
2
goblet cell
2
pancreatic acinar cell
2
pancreatic ductal cell
2
pancreatic polypeptide-secreting cell
2
skeletal muscle fiber
2
smooth muscle cell
2
vascular associated smooth muscle cell
1
CD8-positive, alpha-beta T cell
1
Satellite Cells, Skeletal Muscle
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
bronchial goblet cell
1
cardiac muscle cell
1
cell
1
conventional dendritic cell
1
cortical cell of adrenal gland
1
granulosa cell
1
hepatocyte
1
keratinocyte
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary gland epithelial cell
1
mast cell
1
megakaryocyte
1
memory B cell
1
mesothelial cell
1
monocyte
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
natural killer cell mediated cytotoxicity
1
non-classical monocyte
1
pancreatic endocrine cell
1
pancreatic stellate cell
1
parietal cell
1
peptic cell
1
plasmacytoid dendritic cell
1
regulatory T cell
1
stellate neuron
1
thyroid follicular cell
1
type II pneumocyte
Organ
1
adrenal gland
1
epithelium
Date released
1
February, 2024
Software used
1
deltasvm
Lab
1
Bing Ren, UCSD
Project
1
AMP
RFA
1
AMP
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FileSet
DSR192HXJ
released
Annotation file set
: Variant allelic effects annotation of Adrenal cortical cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP