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Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
5
candidate regulatory elements
5
target gene predictions
3
chromatin state
1
binding sites
1
eQTL
1
histone modifications
1
variant allelic effects
Annotation Category
5
Target gene links
1
Genetic variant effects
Annotation type Category
4
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
HiC
1
pCHi-C
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
6
tissue
Biosample term
17
small intestine
6
body of pancreas
6
pancreas
5
pancreatic delta cell
4
endocrine pancreas
4
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic ductal cell
3
pancreatic A cell
3
type B pancreatic cell
2
EndoC_BH1
2
Panc1
2
duodenal mucosa
2
islet of Langerhans
2
muscle layer of duodenum
2
pancreatic polypeptide-secreting cell
1
8988T
1
HPDE6-E6E7
1
enterocyte of epithelium of small intestine
1
pancreatic endocrine cell
1
pancreatic stellate cell
1
small intestine goblet cell
Organ
6
pancreas
0
small intestine
Life stage
4
adult
Date released
2
March, 2020
2
September, 2022
1
May, 2020
1
May, 2021
Software used
2
r
1
abc
1
deltasvm
1
hiccups
1
nospecificsoft_customcode
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
Showing 6 of 6 results
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Download
FileSet
DSR310PTQ
released
Annotation file set
: Target gene predictions for BSS01407 pancreas from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR352GMB
released
Annotation file set
: Target gene predictions for BSS01406 pancreas from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR213AOJ
released
Annotation file set
: enhancer-gene predicton of pancreas-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR848MLC
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreas DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR462PPV
released
Annotation file set
: A target gene prediction annotation in pancreas of DSR905BNL Hi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR304SKW
released
Annotation file set
: A target gene prediction annotation in Human Pancreas of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP