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Schema
Citing CMDGA
Clear Filters
Annotation type
11
accessible chromatin
5
target gene predictions
2
eQTL
1
gene expression
Annotation Category
5
Target gene links
Annotation type Category
43
DNase-seq
ChIP-seq
4
ATAC-seq
4
H3K27ac ChIP-Seq
1
pCHi-C
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
3
tissue
1
in vitro differentiated cells
1
primary cell
Biosample term
2
spleen
2
trophoblast cell
1
placenta
Organ
74
epithelium
57
embryo
54
uterus
38
connective tissue
32
blood
32
bodily fluid
31
pancreas
18
intestine
16
brain
13
heart
12
musculature of body
11
large intestine
10
pituitary gland
10
skin of body
8
lung
7
adrenal gland
7
liver
7
stomach
7
vasculature
6
blood vessel
5
adipose tissue
5
mammary gland
4
small intestine
3
esophagus
3
extraembryonic component
3
gonad
3
limb
3
ovary
3
thymus
2
artery
2
bone element
2
bone marrow
2
prostate gland
2
spleen
2
thyroid gland
2
vein
1
breast
1
bronchus
1
lymph node
1
lymphatic vessel
1
lymphoid tissue
1
penis
1
placenta
1
spinal cord
1
urinary bladder
Date released
4
May, 2021
1
March, 2020
Software used
4
abc
1
nospecificsoft_customcode
Lab
4
Jesse Engreitz, Stanford University
1
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type_category!
ChIP-seq
biosample_term_name!
KARPAS-422 cell
Showing 5 of 5 results
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Download
FileSet
DSR630TXR
released
Annotation file set
: enhancer-gene predicton of trophoblast_cell-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR619BAN
released
Annotation file set
: enhancer-gene predicton of spleen-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR831KJP
released
Annotation file set
: enhancer-gene predicton of placenta-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR250DDG
released
Annotation file set
: enhancer-gene predicton of H1_BMP4_Derived_Trophoblast_Cultured_Cells-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR666FEH
released
Annotation file set
: A target gene prediction annotation in Human Spleen of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP