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Citing CMDGA
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Annotation type
3
chromatin state
1
accessible chromatin
1
binding sites
1
histone modifications
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
51
HeLa-S3
37
H1-hESC
19
HFFc6
16
K562
6
GM12878
6
H9
6
lymphocyte
6
olfactory receptor cell
4
CyT49
4
HUES8
4
iPSC derived cell line
3
cardiomyocytes (cardiac muscle cell)
3
psoas muscle
2
CD4-positive, alpha-beta T cell
2
HCT116
2
aorta
2
heart left ventricle
2
heart right ventricle
2
liver
2
lymphocyte of B lineage (iPSC)
2
pancreas
2
thymus
1
Ammon's horn
1
B cell
1
B-lymphoblastoid cell line
1
CD8-positive, alpha-beta T cell
1
EndoC_BH1
1
GM18486
1
GM18505
1
GM18507
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM19238
1
GM19239
1
GM19240
1
HepG2
1
activated CD4-positive, alpha-beta T cell
1
adipose tissue
1
adrenal gland
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
bladder (urinary bladder)
1
cardiac precursors (cardiac muscle cell)
1
cell
1
dorsolateral prefrontal cortex
1
embryonic stem cell
1
endothelial cell of umbilical vein
1
erythroblast
1
esophagus
1
fibroblast cell line
1
gastric (mucosa of stomach)
1
heart
1
inflammatory macrophage
1
islet of Langerhans
1
lung
1
macrophage
1
megakaryocyte
1
mesenchymal stem cell
1
mesendoderm
1
monocyte
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
neural progenitor cell
1
neutrophil
1
ovary
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
right cardiac atrium
1
sigmoid colon
1
small intestine
1
spleen
1
trophoblast
1
white adipose cell
Organ
1
connective tissue
Date released
1
March, 2020
Software used
1
nospecificsoft_customcode
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type_category!
DNase-seq
month_released!
August, 2018
November, 2019
Showing 1 of 1 results
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Download
FileSet
DSR333DPA
released
Annotation file set
: A target gene prediction annotation in Human Mesenchymal Stem Cell of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP