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Citing CMDGA
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Annotation type
21
chromatin state
3
gene expression
1
accessible chromatin
1
binding sites
1
histone modifications
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
19
ChIP-seq
DNase-seq
1
HiC
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
51
HeLa-S3
37
H1-hESC
19
HFFc6
16
K562
6
GM12878
6
H9
6
lymphocyte
4
CyT49
4
HUES8
4
iPSC derived cell line
3
cardiomyocytes (cardiac muscle cell)
3
psoas muscle
2
aorta
2
heart left ventricle
2
heart right ventricle
2
liver
2
lymphocyte of B lineage (iPSC)
2
pancreas
2
thymus
1
Ammon's horn
1
B-lymphoblastoid cell line
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
EndoC_BH1
1
GM18486
1
GM18505
1
GM18507
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM19238
1
GM19239
1
GM19240
1
HepG2
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
adipose tissue
1
adrenal gland
1
bladder (urinary bladder)
1
cardiac precursors (cardiac muscle cell)
1
dorsolateral prefrontal cortex
1
embryonic stem cell
1
esophagus
1
fibroblast cell line
1
gastric (mucosa of stomach)
1
heart
1
islet of Langerhans
1
lung
1
mesenchymal stem cell
1
mesendoderm
1
neural progenitor cell
1
ovary
1
right cardiac atrium
1
small intestine
1
spleen
1
trophoblast
1
undifferentiated ESC (H9 cell line)
1
white adipose cell
Organ
1
heart
Life stage
1
fetal
Date released
1
March, 2020
Software used
1
hiccups
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type_category!
DNase-seq
biosample_term_name!
ES-I3
biosample_type!
primary cell
organ_slims!
large intestine
Showing 1 of 1 results
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Download
FileSet
DSR771SNY
released
Annotation file set
: A target gene prediction annotation in heart of DSR786VPZ Hi-C
Lab:
AMP-T2D consortium
Project:
AMP