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Citing CMDGA
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Annotation type
4
accessible chromatin
2
target gene predictions
1
variant allelic effects
Annotation Category
2
Target gene links
Annotation type Category
2
ATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
7
endothelial cell
3
colon epithelial cell
3
pancreatic delta cell
2
cortical cell of adrenal gland
2
keratinocyte
2
luminal epithelial cell of mammary gland
2
pancreatic A cell
2
pancreatic acinar cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic ductal cell
2
type B pancreatic cell
2
type II pneumocyte
1
EndoC_BH1
1
basal cell of epidermis
1
cardiac endothelial cell
1
club cell
1
eccrine cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
endothelial cell of umbilical vein
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
foveolar cell of stomach
1
granular cell of epidermis
1
hepatocyte
1
mammary gland epithelial cell
1
mesothelial cell
1
myoepithelial cell
1
non keratinizing barrier epithelial cell
1
pancreatic polypeptide-secreting cell
1
paneth cell
1
parietal cell
1
peptic cell
1
respiratory goblet cell
1
small intestine goblet cell
1
stomach neuroendocrine cell
1
thyroid follicular cell
1
type I cell of adrenal cortex
1
type I pneumocyte
1
type II cell of adrenal cortex
Organ
2
epithelium
2
lung
Date released
2
November, 2021
Software used
2
abc
Lab
2
Bing Ren, UCSD
Project
2
ENCODE
RFA
2
ENCODE3
annotation_type_category!
DNase-seq
relevant_life_stage!
adult
Showing 2 of 2 results
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Download
FileSet
DSR588HKS
released
Annotation file set
: Target gene predictions of Alverolar Type 2,Immune from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR775ZRO
released
Annotation file set
: Target gene predictions of Alveolar Type 2 (AT2) Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE