Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
36
chromatin state
22
binding sites
20
gene expression
10
accessible chromatin
10
histone modifications
9
Fine-mapped variants
9
differential activity
6
eQTL
3
caQTL
3
target gene predictions
3
variant allelic effects
Annotation Category
3
Target gene links
Annotation type Category
DNase-seq
27
ChIP-seq
4
ATAC-seq
4
H3K27ac ChIP-Seq
2
HiC
1
pCHi-C
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
2
aorta
1
endothelial cell of umbilical vein
Organ
64
epithelium
52
embryo
52
uterus
28
blood
28
bodily fluid
25
connective tissue
24
pancreas
12
intestine
10
heart
6
large intestine
6
musculature of body
5
adrenal gland
5
brain
5
skin of body
5
stomach
liver
4
lung
4
vasculature
3
blood vessel
3
esophagus
3
mammary gland
3
small intestine
2
adipose tissue
2
bone element
2
bone marrow
2
gonad
2
ovary
2
thymus
1
bronchus
1
lymphatic vessel
1
lymphoid tissue
1
spleen
1
thyroid gland
1
urinary bladder
1
vein
0
lymph node
Life stage
1
adult
Date released
3
March, 2020
Software used
2
hiccups
1
nospecificsoft_customcode
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type_category!
DNase-seq
organ_slims!
liver
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR049KAF
released
Annotation file set
: A target gene prediction annotation in endothelial cell of umbilical vein of DSR430XOJ Hi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR428FCH
released
Annotation file set
: A target gene prediction annotation in aorta of DSR073ZJB Hi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR452SBJ
released
Annotation file set
: A target gene prediction annotation in Human Aorta of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP