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Schema
Citing CMDGA
Clear Filters
Annotation type
4
binding sites
4
target gene predictions
3
candidate regulatory elements
3
chromatin state
3
histone modifications
2
accessible chromatin
1
variant allelic effects
Annotation Category
4
Target gene links
Annotation type Category
3
ATAC-seq
3
DNase-seq
2
ChIP-seq
H3K27ac ChIP-Seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
4
foreskin keratinocyte
4
keratinocyte
3
fibroblast of dermis
3
skin fibroblast
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
foreskin fibroblast
2
lower leg skin
1
COLO829
1
GM23248
1
RPMI7951
1
SK-MEL-5
1
basal cell of epidermis
1
epidermal melanocyte
1
granular cell of epidermis
1
iPS DF 19.11
1
iPS DF 19.7
1
iPS DF 4.7 Cell Line
1
iPS DF 6.9
1
iPS-11a
1
iPS-15b
1
iPS-18a
1
iPS-18c
1
iPS-20b
1
skin of body
Organ
5
mammary gland
4
epithelium
4
skin of body
Life stage
2
unknown
Date released
2
November, 2021
2
September, 2022
Software used
2
abc
2
r
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
Project
2
AMP
2
ENCODE
RFA
2
AMP
2
ENCODE3
annotation_type_category!
H3K27ac ChIP-Seq
biosample_term_name!
T-cell
Showing 4 of 4 results
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Download
FileSet
DSR125EUW
released
Annotation file set
: Target gene predictions for BSS01071 keratinocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR555IYR
released
Annotation file set
: Target gene predictions for BSS01068 keratinocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR681TKD
released
Annotation file set
: Target gene predictions of Keratinocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR385FIQ
released
Annotation file set
: Target gene predictions of Keratinocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE