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Schema
Citing CMDGA
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Annotation type
16
histone modifications
14
gene expression
12
accessible chromatin
5
candidate regulatory elements
4
binding sites
4
chromatin state
4
target gene predictions
1
eQTL
Annotation Category
4
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
pCHi-C
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
in vitro differentiated cells
Biosample term
55
HeLa-S3
39
H1-hESC
23
K562
21
stomach
20
heart
19
A549
19
HFFc6
18
CD14-positive monocyte
16
adrenal gland
16
brain
16
lung
16
muscle of arm
16
small intestine
15
placenta
14
kidney
14
large intestine
14
muscle of leg
13
left lung
13
muscle of back
12
thymus
11
common myeloid progenitor, CD34-positive
11
right lung
10
pituitary stalk
10
right kidney
9
hematopoietic multipotent progenitor cell
9
left kidney
9
liver
9
pericyte cell
9
renal cortex interstitium
9
renal pelvis
8
GM12878
8
H9
8
spinal cord
7
B cell
7
adipose tissue
7
endothelial cell
7
lymphocyte
7
psoas muscle
7
smooth muscle cell
7
spleen
7
trophoblast cell
6
MCF-7
6
dendritic cell
6
heart left ventricle
6
olfactory receptor cell
6
sigmoid colon
5
CD8-positive, alpha-beta memory T cell
5
adipocyte
5
body of pancreas
5
gastrocnemius medialis
5
mononuclear cell
5
muscle of trunk
5
natural killer cell
5
ovary
5
thyroid gland
5
transverse colon
4
CD8-positive, alpha-beta T cell
4
CyT49
4
HUES8
4
chorionic villus
4
endothelial cell of umbilical vein
4
fibroblast
4
foreskin keratinocyte
4
heart right ventricle
4
iPSC derived cell line
4
neural progenitor cell
4
pancreas
4
pancreatic delta cell
3
CD4-positive, alpha-beta memory T cell
3
HCT116
3
Peyer's patch
3
SK-N-SH
3
T cell
3
aorta
3
astrocyte
3
breast epithelium
3
caudate nucleus
3
colon epithelial cell
3
coronary artery
3
endocrine pancreas
3
endometrium adenocarcinoma
3
fibroblast of cardiac tissue
3
foreskin fibroblast
3
hepatocyte
3
immortal human breast epithelial cell line cell
3
keratinocyte
3
layer of hippocampus
3
luminal epithelial cell of mammary gland
3
macrophage
3
mammary gland epithelial cell
3
mesenchymal stem cell
3
neurosphere
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
regulatory T cell
3
retina
3
skin fibroblast
3
testis
3
tibial nerve
3
type B pancreatic cell
3
upper lobe of left lung
2
A673
2
BJAB cell
2
Brodmann (1909) area 46
2
CD4-positive helper T cell
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
H7-hESC
2
HAP-1
2
HT-29
2
HepG2
2
IMR-90
2
Jurkat
2
KARPAS-422 cell
2
LNCaP clone FGC
2
LoVo cell
2
MCF 10A cell
2
MM.1S
2
NAMALWA cell
2
OCI-LY7
2
SK-N-DZ
2
T-cell
2
T-helper 1 cell
2
T-helper 2 cell
2
T47D
2
THP-1
2
U937
2
angular gyrus
2
ascending aorta
2
bipolar neuron
2
blood vessel smooth muscle cell
2
cardiac muscle cell
2
cardiomyocytes (cardiac muscle cell)
2
cerebellum
2
chorion membrane
2
cingulate gyrus
2
colonic mucosa
2
cortical cell of adrenal gland
2
dermis blood vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
enteric smooth muscle cell
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
fibroblast of dermis
2
fibroblast of lung
2
frontal cortex
2
gabaergic neuron
2
glutamatergic neuron
2
iPS DF 19.11
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
memory B cell
2
mesendoderm
2
monocyte
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
naive B cell
2
naive T cell
2
omental fat pad
2
parathyroid adenoma
2
prostate gland
2
right atrium auricular region
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
skeletal muscle tissue
2
smooth muscle cell of the esophagus
2
stomach smooth muscle
2
substantia nigra
2
temporal lobe
2
thoracic aorta
2
tibial artery
2
tongue
2
trophoblast
2
type II pneumocyte
2
urinary bladder
2
uterus
2
vagina
1
8988T
1
A172
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
Life stage
4
embryonic
unknown
Date released
4
September, 2022
Software used
4
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type_category!
pCHi-C
month_released!
August, 2018
relevant_life_stage!
unknown
Showing 4 of 4 results
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Download
FileSet
DSR098BJF
released
Annotation file set
: Target gene predictions for BSS01372 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR444LZF
released
Annotation file set
: Target gene predictions for BSS01371 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR166MST
released
Annotation file set
: Target gene predictions for BSS01370 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR989NQF
released
Annotation file set
: Target gene predictions for BSS00272 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP