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Citing CMDGA
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Annotation type
4
target gene predictions
Annotation Category
4
Target gene links
Annotation type Category
5
DNase-seq
4
ATAC-seq
4
HiC
3
H3K27ac ChIP-Seq
3
pCHi-C
2
ChIP-seq
1
snATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
2
cell line
2
in vitro differentiated cells
Biosample term
51
HeLa-S3
37
H1-hESC
19
HFFc6
16
K562
6
GM12878
6
H9
6
lymphocyte
6
olfactory receptor cell
4
CyT49
4
HUES8
4
iPSC derived cell line
2
HCT116
2
cardiomyocytes (cardiac muscle cell)
2
psoas muscle
1
EndoC_BH1
1
GM18486
1
GM18505
1
GM18507
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM19238
1
GM19239
1
GM19240
1
adult endothelial progenitor cell
1
aorta
1
cardiac precursors (cardiac muscle cell)
1
endothelial cell of umbilical vein
1
heart
1
heart left ventricle
1
heart right ventricle
1
liver
1
lymphocyte of B lineage (iPSC)
1
pancreas
0
CD8-positive, alpha-beta T cell
Organ
2
intestine
2
large intestine
Life stage
1
adult
Date released
2
February, 2024
2
March, 2020
Software used
2
hiccups
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR311TAK
released
Annotation file set
: Target gene predictions from Hi-C on HCT116. wild-type
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR162XYA
released
Annotation file set
: Target gene predictions from Hi-C on HCT116. WAPL KD
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR804DQM
released
Annotation file set
: A target gene prediction annotation in cardiomyocytes (cardiac muscle cell) of DSR722REK Hi-C E-MTAB-6014
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR453PFX
released
Annotation file set
: A target gene prediction annotation in cardiomyocytes (cardiac muscle cell) of DSR235SPD Hi-C
Lab:
AMP-T2D consortium
Project:
AMP