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Schema
Citing CMDGA
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Annotation type
10
gene expression
4
accessible chromatin
2
binding sites
2
variant allelic effects
1
caQTL
1
eQTL
1
histone modifications
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
7
hg19
GRCh38
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
4
endothelial cell of umbilical vein
4
foreskin keratinocyte
3
breast epithelium
3
epithelial cell of prostate
3
hepatocyte
3
keratinocyte
3
mammary gland epithelial cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
2
bronchial epithelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
esophagus squamous epithelium
2
kidney tubule cell
2
myoepithelial cell of mammary gland
2
pancreatic acinar cell
2
pancreatic ductal cell
1
EndoC_BH1
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
colon epithelial cell
1
endothelial cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
luminal epithelial cell of mammary gland
1
lung microvascular endothelial cell
1
mammary epithelial cell
1
non-pigmented ciliary epithelial cell
1
pancreatic A cell
1
pancreatic polypeptide-secreting cell
1
pulmonary artery endothelial cell
1
renal cortical epithelial cell
1
retinal pigment epithelial cell
1
type B pancreatic cell
Organ
2
blood vessel
2
kidney
2
ureter
2
vasculature
1
epithelium
Date released
1
January, 2021
Software used
1
cicero
Lab
1
Kyle Gaulton, UCSD
Project
1
T1D
RFA
1
T1D
assembly!
GRCh38
Showing 1 of 1 results
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Download
FileSet
DSR305VNP
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of endothelial
Lab:
Kyle Gaulton, UCSD
Project:
T1D