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Citing CMDGA
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Annotation type
8
gene expression
3
candidate regulatory elements
3
target gene predictions
2
variant allelic effects
1
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
3
Target gene links
Annotation type Category
3
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
4
hg19
GRCh38
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
in vitro differentiated cells
Biosample term
10
liver
6
ovary
3
HepG2
3
hepatocyte
1
HuH-7
1
HuH-7.5
1
hepatic stellate cell
1
right lobe of liver
Organ
3
epithelium
3
liver
0
ovary
Life stage
1
embryonic
1
unknown
Date released
2
September, 2022
1
May, 2021
Software used
2
r
1
abc
Lab
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
3
AMP
RFA
3
AMP
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GRCh38
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Download
FileSet
DSR926ULW
released
Annotation file set
: Target gene predictions for BSS00556 hepatocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR361WHM
released
Annotation file set
: Target gene predictions for BSS00554 hepatocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR604IOP
released
Annotation file set
: enhancer-gene predicton of hepatocyte-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP