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Citing CMDGA
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Annotation type
3
differential activity
3
gene expression
2
accessible chromatin
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Target gene links
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigBed narrowPeak
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
5
body of pancreas
5
pancreas
5
thyroid gland
4
endocrine pancreas
2
Panc1
1
8988T
1
EndoC_BH1
1
HPDE6-E6E7
1
islet of Langerhans
1
pancreatic A cell
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
type B pancreatic cell
Organ
1
epithelium
1
pancreas
0
thyroid gland
Life stage
1
adult
Date released
1
September, 2022
Software used
1
cicero
Lab
1
Kyle Gaulton, UCSD
Project
2
T1D
1
AMP
1
ENCODE
RFA
1
AMP
month_released!
January, 2018
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Download
FileSet
DSR236XNZ
released
Annotation file set
: pancreatic delta cell co-accessibility linking chromatin sites to gene promoters annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP