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Citing CMDGA
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Annotation type
5
chromatin state
4
target gene predictions
2
accessible chromatin
2
candidate regulatory elements
1
binding sites
1
gene expression
1
variant allelic effects
Annotation Category
4
Target gene links
Annotation type Category
3
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
HiC
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
4
endothelial cell of umbilical vein
Organ
120
epithelium
84
embryo
80
musculature of body
78
lung
76
brain
75
connective tissue
75
kidney
73
intestine
58
uterus
55
bodily fluid
53
blood
49
heart
49
limb
44
large intestine
42
pancreas
41
skin of body
36
extraembryonic component
31
vasculature
30
stomach
25
blood vessel
23
small intestine
21
adrenal gland
21
liver
19
mammary gland
17
placenta
16
bone element
15
prostate gland
14
thymus
13
adipose tissue
13
ureter
11
gonad
11
penis
10
esophagus
10
pituitary gland
9
eye
9
lymph node
9
spinal cord
8
artery
8
spleen
7
ovary
6
lymphoid tissue
6
thyroid gland
4
mouth
4
testis
4
vein
3
bone marrow
3
breast
3
bronchus
3
lymphatic vessel
3
nerve
3
skeleton
3
urinary bladder
2
tongue
2
vagina
1
nose
Life stage
2
newborn
Date released
2
September, 2022
1
March, 2020
1
May, 2021
Software used
2
r
1
abc
1
hiccups
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
biosample_term_name!
HAP-1
skin fibroblast
month_released!
February, 2021
Showing 4 of 4 results
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Download
FileSet
DSR936NVU
released
Annotation file set
: Target gene predictions for BSS00298 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR099GIV
released
Annotation file set
: Target gene predictions for BSS00296 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR784TGC
released
Annotation file set
: enhancer-gene predicton of endothelial_cell_of_umbilical_vein-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR049KAF
released
Annotation file set
: A target gene prediction annotation in endothelial cell of umbilical vein of DSR430XOJ Hi-C
Lab:
AMP-T2D consortium
Project:
AMP