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Schema
Citing CMDGA
Clear Filters
Annotation type
18
candidate regulatory elements
4
target gene predictions
3
accessible chromatin
1
chromatin state
1
eQTL
Annotation Category
4
Target gene links
Annotation type Category
3
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
2
primary cell
2
tissue
Biosample term
2
small intestine
1
enterocyte of epithelium of small intestine
1
small intestine goblet cell
Organ
73
epithelium
57
embryo
54
uterus
38
connective tissue
32
blood
32
bodily fluid
30
pancreas
18
intestine
16
brain
13
heart
12
musculature of body
11
large intestine
10
pituitary gland
10
skin of body
8
lung
7
adrenal gland
7
stomach
vasculature
6
blood vessel
5
adipose tissue
5
liver
5
mammary gland
4
small intestine
3
esophagus
3
extraembryonic component
3
gonad
3
limb
3
ovary
3
thymus
2
artery
2
bone element
2
bone marrow
2
prostate gland
2
spleen
2
thyroid gland
2
vein
1
breast
1
bronchus
1
lymph node
1
lymphatic vessel
1
lymphoid tissue
1
penis
1
placenta
1
spinal cord
1
urinary bladder
Date released
September, 2022
2
November, 2021
1
March, 2020
1
May, 2021
Software used
3
abc
1
nospecificsoft_customcode
Lab
2
Bing Ren, UCSD
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
2
ENCODE
RFA
2
AMP
2
ENCODE3
biosample_term_name!
HepG2
month_released!
September, 2022
organ_slims!
vasculature
Showing 4 of 4 results
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Download
FileSet
DSR392SPL
released
Annotation file set
: Target gene predictions of Small Intestinal Goblet Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR802OCO
released
Annotation file set
: Target gene predictions of Small Intestinal Enterocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR515WUM
released
Annotation file set
: enhancer-gene predicton of small_intestine_fetal-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR466XKB
released
Annotation file set
: A target gene prediction annotation in Human Small Bowel of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP