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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
accessible chromatin
3
target gene predictions
2
binding sites
2
chromatin state
1
histone modifications
1
variant allelic effects
Annotation Category
3
Target gene links
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
ATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
2
bronchial epithelial cell
1
club cell
Organ
112
epithelium
79
embryo
75
kidney
74
lung
74
musculature of body
67
intestine
65
connective tissue
63
brain
56
uterus
53
bodily fluid
51
blood
46
heart
46
limb
39
large intestine
39
skin of body
37
pancreas
33
extraembryonic component
28
stomach
28
vasculature
22
blood vessel
22
small intestine
19
adrenal gland
18
liver
16
bone element
16
placenta
13
prostate gland
13
thymus
13
ureter
12
mammary gland
10
adipose tissue
10
esophagus
10
gonad
10
penis
9
eye
8
lymph node
8
spinal cord
7
spleen
6
artery
6
lymphoid tissue
6
ovary
5
thyroid gland
4
mouth
4
testis
3
bone marrow
3
bronchus
3
lymphatic vessel
3
nerve
3
skeleton
3
urinary bladder
3
vein
2
breast
2
tongue
2
vagina
1
nose
Life stage
2
unknown
Date released
2
September, 2022
1
November, 2021
Software used
2
r
1
abc
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
2
AMP
1
ENCODE
RFA
2
AMP
1
ENCODE3
biosample_term_name!
cerebellum
disease_term_name!
breast cancer
lab.title!
Jesse Engreitz, Stanford University
Showing 3 of 3 results
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Download
FileSet
DSR458CQB
released
Annotation file set
: Target gene predictions for BSS00153 bronchial epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR960FTY
released
Annotation file set
: Target gene predictions for BSS00150 bronchial epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR905LLL
released
Annotation file set
: Target gene predictions of Club Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE