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Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
2
accessible chromatin
2
binding sites
1
histone modifications
Annotation Category
3
Target gene links
Annotation type Category
1
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
1
snATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
cell line
Biosample term
52
HeLa-S3
39
H1-hESC
19
HFFc6
19
heart
17
K562
16
CD14-positive monocyte
16
brain
16
lung
16
muscle of arm
16
stomach
15
placenta
15
small intestine
14
large intestine
14
muscle of leg
14
thymus
13
left lung
13
muscle of back
12
kidney
11
adrenal gland
11
right lung
10
pituitary stalk
10
right kidney
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
H9
8
spinal cord
7
GM12878
7
lymphocyte
7
trophoblast cell
6
CD4-positive, alpha-beta memory T cell
6
dendritic cell
6
olfactory receptor cell
5
adipocyte
5
muscle of trunk
5
neural progenitor cell
4
B cell
4
CD8-positive, alpha-beta T cell
4
CyT49
4
HUES8
4
chorionic villus
4
common myeloid progenitor, CD34-positive
4
endothelial cell of umbilical vein
4
foreskin keratinocyte
4
heart left ventricle
4
iPSC derived cell line
4
liver
4
psoas muscle
4
spleen
3
HepG2
3
SK-N-SH
3
T-helper 17 cell
3
chorion membrane
3
epithelial cell of prostate
3
fibroblast of dermis
3
fibroblast of lung
3
foreskin fibroblast
3
heart right ventricle
3
hepatocyte
3
keratinocyte
3
macrophage
3
mesenchymal stem cell
3
mesendoderm
3
monocyte
3
neurosphere
3
neutrophil
3
ovary
3
retina
3
sigmoid colon
3
trophoblast
2
22Rv1
2
A673
2
BJAB cell
2
CD4-positive helper T cell
2
CD4-positive, alpha-beta T cell
2
CD8-positive, alpha-beta memory T cell
2
GM18507
2
H7-hESC
2
HCT116
2
IMR-90
2
Jurkat
2
MCF 10A cell
2
NAMALWA cell
2
PC-9
2
Panc1
2
SK-N-DZ
2
T-cell
2
THP-1
2
U937
2
activated CD4-positive, alpha-beta T cell
2
adipose tissue
2
astrocyte
2
bronchial epithelial cell
2
cardiac muscle cell
2
dermis lymphatic vessel endothelial cell
2
endodermal cell
2
erythroblast
2
eye
2
fibroblast of cardiac tissue
2
iPS DF 19.11
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
megakaryocyte
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
osteoblast
2
pancreas
2
pancreatic acinar cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
pancreatic ductal cell
2
regulatory T cell
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle myoblast
2
skin fibroblast
2
tongue
1
A549
1
AG04449 cell
1
AG04450 cell
1
Ammon's horn
1
B cell, CD19-positive
1
B-lymphoblastoid cell line
1
BE(2)-C
1
BJ cell
1
CD1c-positive myeloid dendritic cell
1
CD56-positive, CD161-positive immature natural killer cell
1
CMK
1
CWRU1
1
DND-41
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
EndoC_BH1
1
G401
1
GM03348
1
GM06990
1
GM08714
1
GM12864
1
GM12865
1
GM12891
1
GM12892
1
GM18486
1
GM18505
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM19238
1
GM19239
1
GM19240
1
HAP-1
1
HCT-116 cell
1
HEK293
1
HEK293T
1
HK-2 cell
1
HT-29
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
KARPAS-422 cell
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
LNCAP
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MG63
1
MM.1S
1
NCCIT cell
1
NCI-H460 cell
1
NT2-D1 cell
1
OCI-LY7
1
SJCRH30
1
SK-N-MC
1
T cell
1
T-helper 1 cell
1
T-helper 2 cell
1
UCSF-4
1
WERI-Rb-1
1
WI38
1
activated CD8-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
Organ
2
bone element
2
bone marrow
1
lung
Life stage
adult
Date released
1
January, 2021
1
May, 2020
1
May, 2021
Software used
1
abc
1
chicago
1
cicero
Lab
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
1
Kyle Gaulton, UCSD
Project
2
AMP
1
T1D
RFA
2
AMP
1
T1D
month_released!
November, 2021
relevant_life_stage!
adult
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR510YWQ
released
Annotation file set
: enhancer-gene predicton of A549_treated_with_ethanol_0.02_percent_for_1_hour-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR345BXM
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR992TVD
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of megakaryocyte
Lab:
AMP-T2D consortium
Project:
AMP