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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
15
histone modifications
10
accessible chromatin
7
gene expression
6
candidate regulatory elements
5
chromatin state
5
target gene predictions
4
binding sites
Annotation Category
5
Target gene links
Annotation type Category
5
ChIP-seq
5
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
4
in vitro differentiated cells
1
cell line
Biosample term
55
HeLa-S3
39
H1-hESC
23
K562
21
stomach
19
A549
19
HFFc6
19
heart
16
adrenal gland
16
brain
16
lung
16
muscle of arm
16
small intestine
15
placenta
14
kidney
14
large intestine
14
muscle of leg
13
left lung
13
muscle of back
13
thymus
11
right lung
10
hematopoietic multipotent progenitor cell
10
pituitary stalk
10
right kidney
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
GM12878
8
H9
8
liver
8
spinal cord
7
adipose tissue
7
lymphocyte
7
spleen
6
MCF-7
6
adipocyte
6
dendritic cell
6
sigmoid colon
5
body of pancreas
5
gastrocnemius medialis
5
heart left ventricle
5
muscle of trunk
5
ovary
5
psoas muscle
5
thyroid gland
5
transverse colon
4
CyT49
4
HUES8
4
chorionic villus
4
endocrine pancreas
4
iPSC derived cell line
4
neural progenitor cell
3
HCT116
3
Peyer's patch
3
SK-N-SH
3
breast epithelium
3
caudate nucleus
3
chorion membrane
3
coronary artery
3
endometrium adenocarcinoma
3
heart right ventricle
3
immortal human breast epithelial cell line cell
3
layer of hippocampus
3
mesenchymal stem cell
3
pancreas
3
retina
3
skeletal muscle tissue
3
testis
3
tibial nerve
3
upper lobe of left lung
2
22Rv1
2
A673
2
BJAB cell
2
Brodmann (1909) area 46
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
H7-hESC
2
HAP-1
2
HT-29
2
HepG2
2
IMR-90
2
Jurkat
2
KARPAS-422 cell
2
LNCaP clone FGC
2
LoVo cell
2
MCF 10A cell
2
MM.1S
2
NAMALWA cell
2
OCI-LY7
2
PC-9
2
Panc1
SK-N-DZ
2
T47D
2
THP-1
2
U937
2
angular gyrus
2
aorta
2
ascending aorta
2
bipolar neuron
2
cerebellum
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
endodermal cell
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
frontal cortex
2
iPS DF 19.11
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mesendoderm
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
omental fat pad
2
parathyroid adenoma
2
prostate gland
2
right atrium auricular region
2
right renal cortex interstitium
2
right renal pelvis
2
stomach smooth muscle
2
substantia nigra
2
temporal lobe
2
thoracic aorta
2
tibial artery
2
tongue
2
trophoblast
2
trophoblast cell
2
urinary bladder
2
uterus
2
vagina
1
8988T
1
A172
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
Ammon's horn
1
BE(2)-C
1
BJ cell
1
C4-2B
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12875
1
GM12891
1
GM12892
1
GM18486
1
GM18505
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM23248
1
GM23338
1
H4
1
H54
1
HCT-116 cell
1
HEK293
1
HEK293T
1
HK-2 cell
1
HL-60
1
HPDE6-E6E7
Life stage
4
embryonic
1
adult
Date released
5
September, 2022
March, 2020
Software used
5
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
SK-N-DZ
biosample_type!
primary cell
month_released!
March, 2020
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR098BJF
released
Annotation file set
: Target gene predictions for BSS01372 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR444LZF
released
Annotation file set
: Target gene predictions for BSS01371 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR166MST
released
Annotation file set
: Target gene predictions for BSS01370 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR989NQF
released
Annotation file set
: Target gene predictions for BSS00272 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR248MOE
released
Annotation file set
: Target gene predictions for BSS00069 AG20443 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP