Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
10
candidate regulatory elements
8
binding sites
8
target gene predictions
5
chromatin state
5
histone modifications
3
accessible chromatin
1
variant allelic effects
Annotation Category
8
Target gene links
Annotation type Category
6
DNase-seq
4
ATAC-seq
4
ChIP-seq
2
H3K27ac ChIP-Seq
Available data
8
bed bed3+
File set status
8
released
Genome assembly (visualization)
8
hg19
2
GRCh38
Organism
8
Homo sapiens
Biosample type
7
primary cell
1
cell line
Biosample term
5
keratinocyte
4
fibroblast of dermis
4
foreskin keratinocyte
3
foreskin fibroblast
3
skin fibroblast
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
iPS DF 19.11
2
lower leg skin
1
COLO829
1
GM23248
1
RPMI7951
1
SK-MEL-5
1
basal cell of epidermis
1
epidermal melanocyte
1
fibroblast of arm
1
granular cell of epidermis
1
iPS DF 19.7
1
iPS DF 4.7 Cell Line
1
iPS DF 6.9
1
iPS-11a
1
iPS-15b
1
iPS-18a
1
iPS-18c
1
iPS-20b
1
skin of body
0
CD4-positive, alpha-beta memory T cell
Organ
13
lung
8
skin of body
5
epithelium
3
connective tissue
3
penis
Life stage
2
newborn
2
unknown
Date released
4
September, 2022
2
May, 2021
2
November, 2021
Software used
4
abc
4
r
Lab
4
AMP-T2D consortium
2
Bing Ren, UCSD
2
Jesse Engreitz, Stanford University
Project
6
AMP
2
ENCODE
RFA
6
AMP
2
ENCODE3
Showing 8 of 8 results
table-tab-icon
matrix-icon
Download
FileSet
DSR125EUW
released
Annotation file set
: Target gene predictions for BSS01071 keratinocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR555IYR
released
Annotation file set
: Target gene predictions for BSS01068 keratinocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR923ELC
released
Annotation file set
: Target gene predictions for BSS00697 foreskin fibroblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR058XGD
released
Annotation file set
: Target gene predictions for BSS00353 foreskin fibroblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR681TKD
released
Annotation file set
: Target gene predictions of Keratinocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR385FIQ
released
Annotation file set
: Target gene predictions of Keratinocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR926EGV
released
Annotation file set
: enhancer-gene predicton of keratinocyte-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR506HNX
released
Annotation file set
: enhancer-gene predicton of foreskin_fibroblast-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP