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Schema
Citing CMDGA
Clear Filters
Annotation type
4
target gene predictions
3
accessible chromatin
Annotation Category
4
Target gene links
Annotation type Category
3
ATAC-seq
1
HiC
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Biosample term
9
pericyte cell
6
endothelial cell
6
smooth muscle cell
4
fibroblast
3
cardiomyocytes (cardiac muscle cell)
3
colon epithelial cell
3
psoas muscle
2
aorta
2
astrocyte
2
blood vessel smooth muscle cell
2
cortical cell of adrenal gland
2
enteric smooth muscle cell
2
gabaergic neuron
2
glutamatergic neuron
2
heart left ventricle
2
heart right ventricle
2
keratinocyte
2
liver
2
luminal epithelial cell of mammary gland
2
pancreas
2
pancreatic A cell
2
smooth muscle cell of the esophagus
2
type B pancreatic cell
2
type II pneumocyte
1
Ammon's horn
1
B-lymphoblastoid cell line
1
CD4-positive, alpha-beta T cell
1
CD8-positive, alpha-beta T cell
1
EndoC_BH1
1
HepG2
1
adipose tissue
1
adrenal gland
1
alveolar macrophage
1
basal cell
1
basal cell of epidermis
1
bladder (urinary bladder)
1
cardiac endothelial cell
1
cardiac precursors (cardiac muscle cell)
1
ciliated cell
1
club cell
1
colon goblet cell
1
dorsolateral prefrontal cortex
1
eccrine cell
1
embryonic stem cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
endothelial cell of umbilical vein
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
esophagus
1
fat cell
1
fibroblast cell line
1
fibroblast of cardiac tissue
1
foveolar cell of stomach
1
gastric (mucosa of stomach)
1
granular cell of epidermis
1
heart
1
hepatocyte
1
intestinal tuft cell
1
lung
1
luteal cell
1
lymphocyte of B lineage (iPSC)
1
macrophage
1
mammary gland epithelial cell
1
mast cell
1
mature NK T cell
1
melanocyte
1
memory B cell
1
mesenchymal stem cell
1
mesendoderm
1
mesothelial cell
1
microglial cell
1
myoepithelial cell
1
naive t cell
1
neural progenitor cell
1
non keratinizing barrier epithelial cell
1
oligodendrocyte
1
oligodendrocyte precursor cell
1
ovary
1
pancreatic acinar cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
paneth cell
1
parietal cell
1
peptic cell
1
plasma cell
1
regular atrial cardiac myocyte
1
respiratory goblet cell
1
right cardiac atrium
1
schwann cell
1
sigmoid colon
1
skeletal muscle fibroblast
1
skeletal muscle satellite cell
1
skin fibroblast
1
small intestine
1
small intestine goblet cell
1
spleen
1
stomach neuroendocrine cell
1
stromal cell
1
thymus
1
thyroid follicular cell
1
trophoblast
1
type I cell of adrenal cortex
1
type I muscle cell
1
type I pneumocyte
1
type II cell of adrenal cortex
1
type II muscle cell
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
1
white adipose cell
Organ
2
epithelium
2
esophagus
1
intestine
1
pancreas
1
small intestine
Date released
3
November, 2021
1
March, 2020
Software used
3
abc
1
hiccups
Lab
3
Bing Ren, UCSD
1
AMP-T2D consortium
Project
3
ENCODE
1
AMP
RFA
3
ENCODE3
1
AMP
Showing 4 of 4 results
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Download
FileSet
DSR738CKV
released
Annotation file set
: Target gene predictions of Smooth Muscle (Esophageal Muscularis) 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR513MXE
released
Annotation file set
: Target gene predictions of Smooth Muscle (Esophageal Muscularis) 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR392SPL
released
Annotation file set
: Target gene predictions of Small Intestinal Goblet Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR373FUA
released
Annotation file set
: A target gene prediction annotation in EndoC_BH1 of DSR433ZII Hi-C
Lab:
AMP-T2D consortium
Project:
AMP