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Schema
Citing CMDGA
Clear Filters
Annotation type
3
binding sites
2
histone modifications
2
target gene predictions
1
accessible chromatin
1
candidate regulatory elements
Annotation Category
2
Target gene links
Annotation type Category
1
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
1
HiC
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
52
HeLa-S3
38
H1-hESC
19
HFFc6
17
K562
10
pituitary stalk
7
GM12878
7
H9
6
lymphocyte
4
CyT49
4
HUES8
4
iPSC derived cell line
2
BJAB cell
2
HCT116
2
HepG2
2
Jurkat
2
MCF 10A cell
2
THP-1
2
U937
1
A549
1
A673
1
B-lymphoblastoid cell line
1
EndoC_BH1
1
GM18486
1
GM18505
1
GM18507
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM19238
1
GM19239
1
GM19240
1
H7-hESC
1
HAP-1
1
HCT-116 cell
1
HT-29
1
IMR-90
1
KARPAS-422 cell
1
LNCAP
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MM.1S
1
NCCIT cell
1
OCI-LY7
1
PC-9
1
Panc1
1
SK-N-SH
1
fibroblast cell line
1
iPS DF 19.11
1
induced pluripotent stem cell
1
macrophage
1
monocyte
Organ
2
blood
2
bodily fluid
Date released
1
February, 2024
1
May, 2021
September, 2022
Software used
1
abc
Lab
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
2
AMP
month_released!
September, 2022
organ_slims!
bone element
Showing 2 of 2 results
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Download
FileSet
DSR429KPP
released
Annotation file set
: Target gene predictions from Hi-C on lympoblastoid cell lines from 1000G individuals. GM19099
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR666YAE
released
Annotation file set
: enhancer-gene predicton of OCI-LY7-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP