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Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
2
accessible chromatin
2
candidate regulatory elements
1
binding sites
1
chromatin state
1
histone modifications
1
variant allelic effects
Annotation Category
3
Target gene links
Annotation type Category
2
ATAC-seq
2
DNase-seq
1
ChIP-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
cell line
1
primary cell
Biosample term
23
K562
8
GM12878
5
thyroid gland
2
GM19238
2
GM19239
2
GM19240
2
HAP-1
2
NAMALWA cell
2
OCI-LY7
1
CMK
1
DOHH2
1
GM06990
1
GM12875
1
GM12891
1
GM12892
1
GM18505
1
GM19099
1
GM19193
1
HL-60
1
KBM-7
1
NB4
1
RPMI8226
1
SU-DHL-6
1
thyroid follicular cell
Organ
2
blood
2
bodily fluid
1
epithelium
1
thyroid gland
Life stage
1
adult
Date released
1
May, 2021
1
November, 2021
1
September, 2022
Software used
2
abc
1
r
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
2
AMP
1
ENCODE
RFA
2
AMP
1
ENCODE3
organ_slims!
pericardium
Showing 3 of 3 results
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Download
FileSet
DSR765USM
released
Annotation file set
: Target gene predictions for BSS00491 HAP-1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR121IWB
released
Annotation file set
: Target gene predictions of Thyroid Follicular Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR155AOX
released
Annotation file set
: enhancer-gene predicton of HAP1 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP