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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
3
chromatin state
3
target gene predictions
2
accessible chromatin
2
binding sites
2
histone modifications
Annotation Category
3
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
cell line
Biosample term
54
HeLa-S3
38
H1-hESC
22
K562
20
heart
19
HFFc6
19
stomach
16
brain
16
muscle of arm
16
small intestine
15
adrenal gland
14
kidney
14
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
muscle of back
13
muscle of leg
13
thymus
10
hematopoietic multipotent progenitor cell
10
right kidney
9
B cell
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
liver
9
renal cortex interstitium
9
renal pelvis
7
CD8-positive, alpha-beta memory T cell
7
GM12878
7
H9
7
adipose tissue
7
heart left ventricle
7
lymphocyte
7
psoas muscle
7
spinal cord
7
spleen
6
mononuclear cell
6
olfactory receptor cell
6
sigmoid colon
5
MCF-7
5
heart right ventricle
5
neural progenitor cell
5
ovary
5
trophoblast cell
4
CD14-positive monocyte
4
CyT49
4
HUES8
4
T cell
4
aorta
4
body of pancreas
4
chorionic villus
4
endocrine pancreas
4
foreskin keratinocyte
4
gastrocnemius medialis
4
iPSC derived cell line
4
muscle of trunk
4
natural killer cell
4
pancreas
4
regulatory T cell
4
thyroid gland
4
transverse colon
3
HCT116
3
Peyer's patch
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
cardiomyocytes (cardiac muscle cell)
3
caudate nucleus
3
chorion membrane
3
endometrium adenocarcinoma
3
endothelial cell of umbilical vein
3
esophagus
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
immortal human breast epithelial cell line cell
3
layer of hippocampus
3
mammary gland epithelial cell
3
mesenchymal stem cell
3
naive T cell
3
neurosphere
3
neutrophil
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
retina
3
skeletal muscle tissue
3
testis
3
tibial nerve
3
trophoblast
2
22Rv1
2
Ammon's horn
2
Brodmann (1909) area 46
2
CD4-positive, alpha-beta T cell
2
CD8-positive, alpha-beta T cell
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
HepG2
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
activated CD4-positive, alpha-beta T cell
2
adipocyte
2
angular gyrus
2
ascending aorta
2
breast epithelium
2
bronchial epithelial cell
2
cerebellum
2
cingulate gyrus
2
colonic mucosa
2
coronary artery
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
epithelial cell of prostate
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
foreskin fibroblast
2
frontal cortex
2
hepatocyte
2
keratinocyte
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
lymphocyte of B lineage (iPSC)
2
macrophage
2
megakaryocyte
2
mesendoderm
2
monocyte
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
omental fat pad
2
parathyroid adenoma
2
prostate gland
2
right atrium auricular region
2
right cardiac atrium
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle myoblast
2
skin fibroblast
2
stomach smooth muscle
2
substantia nigra
2
temporal lobe
2
thoracic aorta
2
tibial artery
2
tongue
2
urinary bladder
2
vagina
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
B-lymphoblastoid cell line
1
BE(2)-C
1
BJ cell
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
EndoC_BH1
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM08714
Disease term
1
colorectal adenocarcinoma
Organ
lung
2
epithelium
2
prostate gland
1
intestine
1
large intestine
Life stage
2
unknown
1
adult
Date released
3
September, 2022
Software used
3
r
abc
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
lung
software_used.software.name!
abc
Showing 3 of 3 results
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Download
FileSet
DSR883VDG
released
Annotation file set
: Target gene predictions for BSS00708 HT-29 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR120KRM
released
Annotation file set
: Target gene predictions for BSS00309 epithelial cell of prostate from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR498KQI
released
Annotation file set
: Target gene predictions for BSS00308 epithelial cell of prostate from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP