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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
Annotation Category
2
Target gene links
Annotation type Category
2
DNase-seq
1
ATAC-seq
1
ChIP-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
14
large intestine
7
sigmoid colon
5
transverse colon
4
colon epithelial cell
3
HCT116
2
HT-29
2
colonic mucosa
2
mucosa of rectum
2
muscle layer of colon
1
HCT-116 cell
1
SW480
1
rectum smooth muscle tissue
Disease term
1
colorectal adenocarcinoma
Organ
2
intestine
2
large intestine
Life stage
1
adult
Date released
1
May, 2021
1
September, 2022
Software used
1
abc
1
r
Lab
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
2
AMP
organ_slims!
bone marrow
bronchus
Showing 2 of 2 results
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Download
FileSet
DSR883VDG
released
Annotation file set
: Target gene predictions for BSS00708 HT-29 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR797VJC
released
Annotation file set
: enhancer-gene predicton of HT29 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP