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Citing CMDGA
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Annotation type
5
target gene predictions
1
gene expression
Annotation Category
5
Target gene links
Annotation type Category
3
pCHi-C
2
HiC
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
4
in vitro differentiated cells
1
cell line
Biosample term
3
cardiomyocytes (cardiac muscle cell)
3
psoas muscle
2
aorta
2
heart left ventricle
2
heart right ventricle
2
liver
2
pancreas
1
Ammon's horn
1
B-lymphoblastoid cell line
1
EndoC_BH1
1
HepG2
1
adipose tissue
1
adrenal gland
1
bladder (urinary bladder)
1
cardiac precursors (cardiac muscle cell)
1
dorsolateral prefrontal cortex
1
embryonic stem cell
1
endothelial cell of umbilical vein
1
esophagus
1
fibroblast cell line
1
gastric (mucosa of stomach)
1
heart
1
lung
1
lymphocyte of B lineage (iPSC)
1
mesenchymal stem cell
1
mesendoderm
1
neural progenitor cell
1
ovary
1
right cardiac atrium
1
sigmoid colon
1
small intestine
1
spleen
1
thymus
1
trophoblast
1
white adipose cell
Organ
1
liver
Life stage
2
adult
Date released
5
March, 2020
5
September, 2022
1
May, 2021
Software used
2
chicago
2
hiccups
1
nospecificsoft_customcode
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
files.file_type!
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Showing 5 of 5 results
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FileSet
DSR804DQM
released
Annotation file set
: A target gene prediction annotation in cardiomyocytes (cardiac muscle cell) of DSR722REK Hi-C E-MTAB-6014
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR453PFX
released
Annotation file set
: A target gene prediction annotation in cardiomyocytes (cardiac muscle cell) of DSR235SPD Hi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR854NSN
released
Annotation file set
: A target gene prediction annotation in cardiomyocytes (cardiac muscle cell) of DSR382TEU pCHi-C E-MTAB-6014
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR499URQ
released
Annotation file set
: A target gene prediction annotation in HepG2 of DSR452PKJ pCHi-C E-MTAB-7144
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR727XIO
released
Annotation file set
: A target gene prediction annotation in Human Neural Prgenitor Cell of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP