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Schema
Citing CMDGA
Clear Filters
Annotation type
9
candidate regulatory elements
7
target gene predictions
5
chromatin state
3
binding sites
2
histone modifications
1
accessible chromatin
Annotation Category
7
Target gene links
Annotation type Category
6
DNase-seq
5
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
HiC
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Biosample type
6
cell line
1
in vitro differentiated cells
Biosample term
55
HeLa-S3
39
H1-hESC
23
K562
21
stomach
20
heart
19
A549
19
CD14-positive monocyte
19
HFFc6
17
adrenal gland
17
lung
17
small intestine
16
brain
16
muscle of arm
15
placenta
14
common myeloid progenitor, CD34-positive
14
kidney
14
large intestine
14
muscle of leg
13
left lung
13
muscle of back
13
thymus
11
right lung
10
hematopoietic multipotent progenitor cell
10
liver
10
pericyte cell
10
pituitary stalk
10
right kidney
9
B cell
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
GM12878
8
H9
8
adipose tissue
8
psoas muscle
8
spinal cord
8
spleen
7
CD8-positive, alpha-beta memory T cell
7
heart left ventricle
7
lymphocyte
7
sigmoid colon
7
smooth muscle cell
7
trophoblast cell
6
MCF-7
6
adipocyte
6
dendritic cell
6
mononuclear cell
6
olfactory receptor cell
6
ovary
5
body of pancreas
5
gastrocnemius medialis
5
heart right ventricle
5
muscle of trunk
5
natural killer cell
5
neural progenitor cell
5
pancreas
5
thyroid gland
5
transverse colon
4
CD8-positive, alpha-beta T cell
4
CyT49
4
HUES8
4
T cell
4
aorta
4
astrocyte
4
chorionic villus
4
endocrine pancreas
4
fibroblast
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
iPSC derived cell line
4
mesenchymal stem cell
4
regulatory T cell
3
HCT116
3
Peyer's patch
3
SK-N-SH
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
caudate nucleus
3
chorion membrane
3
coronary artery
3
endometrium adenocarcinoma
3
esophagus
3
foreskin fibroblast
3
immortal human breast epithelial cell line cell
3
layer of hippocampus
3
macrophage
3
mesendoderm
3
naive T cell
3
neurosphere
3
retina
3
skeletal muscle myoblast
3
skeletal muscle tissue
3
skin fibroblast
3
testis
3
tibial nerve
3
trophoblast
3
upper lobe of left lung
2
22Rv1
2
A673
2
Ammon's horn
2
BJAB cell
2
Brodmann (1909) area 46
2
CD4-positive helper T cell
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
H7-hESC
2
HAP-1
2
HT-29
2
HepG2
2
IMR-90
2
Jurkat
2
KARPAS-422 cell
2
LNCaP clone FGC
2
LoVo cell
2
MCF 10A cell
2
MM.1S
2
NAMALWA cell
2
OCI-LY7
2
PC-9
2
Panc1
2
SK-N-DZ
2
T-cell
T47D
2
THP-1
2
U937
2
angular gyrus
2
ascending aorta
2
bipolar neuron
2
blood vessel smooth muscle cell
2
cardiac muscle cell
2
cardiomyocytes (cardiac muscle cell)
2
cerebellum
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
endodermal cell
2
enteric smooth muscle cell
2
esophagus muscularis mucosa
2
eye
2
fibroblast of breast
2
frontal cortex
2
gabaergic neuron
2
glutamatergic neuron
2
iPS DF 19.11
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
memory B cell
2
monocyte
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
neutrophil
2
omental fat pad
2
osteoblast
2
parathyroid adenoma
2
prostate gland
2
right atrium auricular region
2
right cardiac atrium
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle satellite cell
2
smooth muscle cell of the esophagus
2
stomach smooth muscle
2
substantia nigra
2
temporal lobe
2
thoracic aorta
2
tibial artery
2
tongue
2
urinary bladder
2
uterus
2
vagina
1
8988T
1
A172
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
B cell, CD19-positive
1
B-lymphoblastoid cell line
1
BE(2)-C
1
BJ cell
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CD4-positive, alpha-beta T cell
1
CD56-positive, CD161-positive immature natural killer cell
1
CMK
Disease term
5
breast cancer
Organ
6
mammary gland
Life stage
6
adult
Date released
5
September, 2022
1
March, 2020
1
May, 2021
Software used
5
r
1
abc
chicago
1
hiccups
Lab
6
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
7
AMP
RFA
7
AMP
biosample_term_name!
T47D
organ_slims!
epithelium
software_used.software.name!
chicago
Showing 7 of 7 results
table-tab-icon
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Download
FileSet
DSR208VEV
released
Annotation file set
: Target gene predictions for BSS01244 MCF-7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR811JFD
released
Annotation file set
: Target gene predictions for BSS01243 MCF-7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR701UHJ
released
Annotation file set
: Target gene predictions for BSS01240 MCF-7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR432GFP
released
Annotation file set
: Target gene predictions for BSS01235 MCF-7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR131CPD
released
Annotation file set
: Target gene predictions for BSS01226 MCF-7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR249DLQ
released
Annotation file set
: enhancer-gene predicton of MCF-7-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR360EAO
released
Annotation file set
: A target gene prediction annotation in lymphocyte of B lineage (iPSC) of DSR763JZB Hi-C E-MTAB-6014
Lab:
AMP-T2D consortium
Project:
AMP