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Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
4
target gene predictions
2
candidate regulatory elements
1
binding sites
1
chromatin state
1
histone modifications
1
variant allelic effects
Annotation Category
4
Target gene links
Annotation type Category
3
ATAC-seq
2
DNase-seq
1
ChIP-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
2
cell line
2
primary cell
Biosample term
19
A549
17
lung
13
left lung
11
right lung
4
fibroblast of lung
3
upper lobe of left lung
2
IMR-90
2
PC-9
2
type II pneumocyte
1
NCI-H226 cell
1
NCI-H460 cell
1
WI38
1
lung microvascular endothelial cell
1
type I pneumocyte
Disease term
1
lung adenocarcinoma
Organ
4
lung
2
epithelium
Life stage
1
unknown
Date released
2
November, 2021
1
May, 2021
1
September, 2022
Software used
3
abc
1
r
Lab
2
Bing Ren, UCSD
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
2
ENCODE
RFA
2
AMP
2
ENCODE3
organ_slims!
pancreas
Showing 4 of 4 results
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Download
FileSet
DSR808UQF
released
Annotation file set
: Target gene predictions for BSS01415 PC-9 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR588HKS
released
Annotation file set
: Target gene predictions of Alverolar Type 2,Immune from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR775ZRO
released
Annotation file set
: Target gene predictions of Alveolar Type 2 (AT2) Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR988JBC
released
Annotation file set
: enhancer-gene predicton of PC-9-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP