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Schema
Citing CMDGA
Clear Filters
Annotation type
8
target gene predictions
6
chromatin state
4
accessible chromatin
4
candidate regulatory elements
1
binding sites
1
gene expression
1
histone modifications
Annotation Category
8
Target gene links
Annotation type Category
6
DNase-seq
4
ATAC-seq
4
H3K27ac ChIP-Seq
2
ChIP-seq
1
HiC
1
pCHi-C
Available data
8
bed bed3+
File set status
8
released
Genome assembly (visualization)
8
hg19
Organism
8
Homo sapiens
Biosample type
8
in vitro differentiated cells
2
primary cell
Biosample term
10
hematopoietic multipotent progenitor cell
6
adipocyte
6
dendritic cell
5
neural progenitor cell
3
cardiomyocytes (cardiac muscle cell)
3
mesenchymal stem cell
2
bipolar neuron
2
endodermal cell
2
lymphocyte of B lineage (iPSC)
2
mesendoderm
2
muscle cell
2
trophoblast cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
cardiac mesoderm primordium
1
cardiac muscle cell
1
cardiac precursors (cardiac muscle cell)
1
ectodermal cell
1
embryonic stem cell
1
hepatocyte
1
islet precursor cell
1
mesodermal cell
1
myotube
1
neural cell
1
neuron
1
neuronal stem cell
1
olfactory neurosphere cell line
1
skeletal muscle myoblast
1
smooth muscle cell
1
white adipose cell
Organ
6
connective tissue
Life stage
3
adult
1
unknown
Date released
4
May, 2021
2
September, 2022
1
March, 2020
1
May, 2020
Software used
4
abc
2
r
1
chicago
1
hiccups
Lab
4
AMP-T2D consortium
4
Jesse Engreitz, Stanford University
Project
8
AMP
RFA
8
AMP
biosample_term_name!
left lung
Showing 8 of 8 results
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FileSet
DSR339QKV
released
Annotation file set
: Target gene predictions for BSS00039 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR619LYX
released
Annotation file set
: Target gene predictions for BSS00038 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR039HOA
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d14 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR164LWB
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d6 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR542JXE
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d2 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR941KCA
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d0 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR360EAO
released
Annotation file set
: A target gene prediction annotation in lymphocyte of B lineage (iPSC) of DSR763JZB Hi-C E-MTAB-6014
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR991ZOB
released
Annotation file set
: A target gene prediction annotation in lymphocyte of B lineage (iPSC) of DSR535XNG pCHi-C E-MTAB-6014
Lab:
AMP-T2D consortium
Project:
AMP