Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
5
candidate regulatory elements
5
gene expression
4
target gene predictions
1
accessible chromatin
Annotation Category
4
Target gene links
Annotation type Category
4
snATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
GRCh38
1
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
3
endothelial cell
3
macrophage
3
natural killer cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
2
B cell
2
endothelial cell of lymphatic vessel
2
fibroblast
2
mast cell
1
CD8-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
cholangiocyte
1
conventional dendritic cell
1
endocardial cell
1
erythrocyte
1
hepatic stellate cell
1
hepatocyte
1
megakaryocyte
1
memory B cell
1
monocyte
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell mediated cytotoxicity
1
neuronal stem cell
1
non-classical monocyte
1
pancreatic acinar cell
1
pancreatic ductal cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
pericyte cell
1
plasmacytoid dendritic cell
1
regular ventricular cardiac myocyte
1
regulatory T cell
1
stellate neuron
Disease term
2
heart failure
1
liver disease
Organ
1
connective tissue
Life stage
3
adult
Date released
3
May, 2024
1
January, 2021
Software used
1
cicero
Lab
7
AMP-T2D consortium
5
Jesse Engreitz, Stanford University
4
Kyle Gaulton, UCSD
Project
3
AMP
1
T1D
RFA
3
AMP2
1
T1D
biosample_term_name!
thymus
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR186AHH
released
Annotation file set
: Target gene predictions from snATAC-seq on natural killer cell
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR868EVA
released
Annotation file set
: Target gene predictions from snATAC-seq on natural killer cell
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR439ZSE
released
Annotation file set
: Target gene predictions from snATAC-seq on adipocyte
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR397SUR
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of adaptive_NK
Lab:
Kyle Gaulton, UCSD
Project:
T1D