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Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
Annotation Category
2
Target gene links
Annotation type Category
2
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Biosample term
15
CD14-positive monocyte
10
pituitary stalk
6
dendritic cell
6
endothelial cell
6
smooth muscle cell
3
CD8-positive, alpha-beta T cell
3
astrocyte
3
colon epithelial cell
3
keratinocyte
3
pancreatic A cell
3
type B pancreatic cell
2
BJAB cell
2
CD4-positive helper T cell
2
Jurkat
2
MCF 10A cell
2
T-cell
2
THP-1
2
U937
2
adrenal gland
2
blood vessel smooth muscle cell
2
cortical cell of adrenal gland
2
enteric smooth muscle cell
2
gabaergic neuron
2
glutamatergic neuron
2
hepatocyte
2
luminal epithelial cell of mammary gland
2
macrophage
2
pancreatic acinar cell
2
pancreatic ductal cell
2
smooth muscle cell of the esophagus
2
stomach
2
trophoblast cell
2
type II pneumocyte
1
A549
1
A673
1
B cell
1
B cell, CD19-positive
1
CD4-positive, alpha-beta T cell
1
CD56-positive, CD161-positive immature natural killer cell
1
GM12878
1
H1-hESC
1
H7-hESC
1
H9
1
HAP-1
1
HCT-116 cell
1
HT-29
1
HeLa-S3
1
HepG2
1
IMR-90
1
K562
1
KARPAS-422 cell
1
LNCAP
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MM.1S
1
NCCIT cell
1
OCI-LY7
1
PC-9
1
Panc1
1
SK-N-SH
1
alveolar macrophage
1
basal cell
1
basal cell of epidermis
1
bipolar neuron
1
body of pancreas
1
breast epithelium
1
cardiac endothelial cell
1
cardiac muscle cell
1
cardiac ventricle
1
ciliated cell
1
club cell
1
colon goblet cell
1
common myeloid progenitor, CD34-positive
1
coronary artery
1
eccrine cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
endothelial cell of umbilical vein
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
epithelial cell of prostate
1
erythroblast
1
foveolar cell of stomach
1
gastrocnemius medialis
1
granular cell of epidermis
1
iPS DF 19.11
1
induced pluripotent stem cell
1
intestinal tuft cell
1
large intestine
1
liver
1
mammary epithelial cell
1
mammary gland epithelial cell
1
mast cell
1
mature NK T cell
1
megakaryocyte-erythroid progenitor cell
1
melanocyte
1
memory B cell
1
mesendoderm
1
mesothelial cell
1
microglial cell
1
monocyte
1
muscle of leg
1
muscle of trunk
1
myoepithelial cell
1
myotube
1
naive t cell
1
natural killer cell
1
neuronal stem cell
1
non keratinizing barrier epithelial cell
1
oligodendrocyte
1
oligodendrocyte precursor cell
1
ovary
1
pancreas
1
pancreatic delta cell
1
paneth cell
1
parietal cell
1
peptic cell
1
placenta
1
plasma cell
1
psoas muscle
1
regular atrial cardiac myocyte
1
respiratory goblet cell
1
schwann cell
1
sigmoid colon
1
skeletal muscle fibroblast
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
small intestine
1
small intestine goblet cell
1
smooth muscle cell of the coronary artery
1
spinal cord
1
spleen
1
stomach neuroendocrine cell
1
thymus
1
thyroid follicular cell
1
thyroid gland
1
transverse colon
1
type I cell of adrenal cortex
1
type I muscle cell
1
type I pneumocyte
1
type II cell of adrenal cortex
1
type II muscle cell
1
uterine smooth muscle cell
1
uterus
1
ventricular cardiac muscle cell
Organ
connective tissue
1
intestine
1
large intestine
Date released
1
May, 2021
1
November, 2021
Software used
4
r
2
abc
Lab
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
1
AMP
1
ENCODE
RFA
1
AMP
1
ENCODE3
organ_slims!
connective tissue
Showing 2 of 2 results
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Download
FileSet
DSR612PVM
released
Annotation file set
: Target gene predictions of Melanocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR692JFQ
released
Annotation file set
: enhancer-gene predicton of transverse_colon-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP