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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
15
CD14-positive monocyte
10
pituitary stalk
6
dendritic cell
4
adipocyte
3
CD8-positive, alpha-beta T cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
2
BJAB cell
2
CD4-positive helper T cell
2
Jurkat
2
MCF 10A cell
2
T-cell
2
THP-1
2
U937
2
adrenal gland
2
macrophage
2
monocyte
2
natural killer cell
2
pancreatic acinar cell
2
pancreatic ductal cell
2
stomach
2
trophoblast cell
1
A549
1
A673
1
B cell
1
B cell, CD19-positive
1
CD56-positive, CD161-positive immature natural killer cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
GM12878
1
H1-hESC
1
H7-hESC
1
H9
1
HAP-1
1
HCT-116 cell
1
HT-29
1
HeLa-S3
1
HepG2
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
IMR-90
1
K562
1
KARPAS-422 cell
1
LNCAP
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MM.1S
1
NCCIT cell
1
OCI-LY7
1
PC-9
1
Panc1
1
SK-N-SH
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipose tissue
1
astrocyte
1
beige adipocyte
1
bipolar neuron
1
body of pancreas
1
breast epithelium
1
cardiac muscle cell
1
cardiac ventricle
1
common myeloid progenitor, CD34-positive
1
conventional dendritic cell
1
coronary artery
1
endothelial cell
1
endothelial cell of umbilical vein
1
epithelial cell of prostate
1
erythroblast
1
fibroblast of arm
1
fibroblast of dermis
1
fibroblast of lung
1
foreskin fibroblast
1
gastrocnemius medialis
1
hepatocyte
1
iPS DF 19.11
1
induced pluripotent stem cell
1
keratinocyte
1
large intestine
1
liver
1
mammary epithelial cell
1
megakaryocyte
1
megakaryocyte-erythroid progenitor cell
1
memory B cell
1
mesenchymal stem cell
1
mesendoderm
1
muscle of leg
1
muscle of trunk
1
myotube
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell mediated cytotoxicity
1
neuronal stem cell
1
non-classical monocyte
1
osteoblast
1
ovary
1
pancreas
1
pancreatic A cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
placenta
1
plasmacytoid dendritic cell
1
psoas muscle
1
regulatory T cell
1
sigmoid colon
1
skeletal muscle myoblast
1
small intestine
1
smooth muscle cell of the coronary artery
1
spinal cord
1
spleen
1
stellate neuron
1
thymus
1
thyroid gland
1
transverse colon
1
type B pancreatic cell
1
undifferentiated ESC (H9 cell line)
1
uterus
1
white adipose tissue
Date released
1
January, 2021
Software used
1
cicero
Lab
AMP-T2D consortium
Bing Ren, UCSD
1
Kyle Gaulton, UCSD
Project
1
T1D
RFA
1
T1D
lab.title!
AMP-T2D consortium
Bing Ren, UCSD
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR499CQG
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of regulatory_T
Lab:
Kyle Gaulton, UCSD
Project:
T1D