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Schema
Citing CMDGA
Clear Filters
Annotation type
7
accessible chromatin
7
target gene predictions
6
candidate regulatory elements
6
chromatin state
3
Fine-mapped variants
2
eQTL
2
histone modifications
2
variant allelic effects
1
binding sites
1
caQTL
1
gene expression
Annotation Category
7
Target gene links
Annotation type Category
6
DNase-seq
5
ChIP-seq
2
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
1
GRCh38
Organism
7
Homo sapiens
Biosample type
4
primary cell
3
tissue
Biosample term
20
heart
7
heart left ventricle
5
heart right ventricle
4
fibroblast of cardiac tissue
3
coronary artery
2
right atrium auricular region
2
right cardiac atrium
1
cardiac endothelial cell
1
cardiac ventricle
1
endocardial cell
1
left cardiac atrium
1
smooth muscle cell of the coronary artery
1
ventricular cardiac muscle cell
Organ
7
heart
4
connective tissue
3
artery
3
blood vessel
3
vasculature
Life stage
3
adult
1
embryonic
1
unknown
Date released
5
September, 2022
1
May, 2021
1
November, 2021
Software used
5
r
2
abc
Lab
5
AMP-T2D consortium
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
6
AMP
1
ENCODE
RFA
6
AMP
1
ENCODE3
biosample_term_name!
enteric smooth muscle cell
Showing 7 of 7 results
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FileSet
DSR422SRD
released
Annotation file set
: Target gene predictions for BSS00243 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR035MSO
released
Annotation file set
: Target gene predictions for BSS00242 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR810LVT
released
Annotation file set
: Target gene predictions for BSS00168 fibroblast of cardiac tissue from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR743GKE
released
Annotation file set
: Target gene predictions for BSS00167 fibroblast of cardiac tissue from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR215DPK
released
Annotation file set
: Target gene predictions for BSS00166 fibroblast of cardiac tissue from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR063DIM
released
Annotation file set
: Target gene predictions of Cardiac Fibroblasts from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR233ZIX
released
Annotation file set
: enhancer-gene predicton of coronary_artery-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP